Prioritizing chemicals for developmental neurotoxicity by integrating data from an in vitro assay battery covering key cellular events in neurodevelopment
Authors: Laura A. Hall, Jui-Hua Hsieh, Skylar W. Marvel, Mamta Behl, Ellen Fritsche, Katharina Koch, Anna Kreutz, Marcel Leist, Arantza Muriana, Timothy J. Shafer, Jason P. Stanko, Robert C. Sills, Helena T. Hogberg, Christopher A. McPherson
DOI: https://doi.org/10.22427/NTP-DATA-500-018-001-000-5
Abstract
Thousands of chemicals have not been assessed for developmental neurotoxicity (DNT) despite potential human exposure, prompting efforts to screen chemicals for possible DNT hazard using in vitro approaches. Ninety-five chemicals were screened in an in vitro assay battery (IVB) covering the key neurodevelopmental processes (KNDPs) of proliferation, apoptosis, cell migration, neuronal differentiation, neurite outgrowth, neuronal maturation and synaptogenesis, oligodendrocyte differentiation, and network formation using human and rat (primary cortical) cells. An in vivo assay of zebrafish neurobehavior was also included. This assay battery was sensitive enough to detect effects in the neurodevelopmental processes modeled. The chemicals comprised negative controls and several use classes: drugs, flame retardants, fungicides, herbicides, industrial chemicals (including PFAS), and insecticides. A data analysis pipeline was developed using a benchmark concentration approach and included multi-objective optimization (Pareto) and ToxPi analysis to integrate data from the individual assays to evaluate DNT hazard and prioritize chemicals, ranking them for further evaluation. Although the zebrafish assay was the most sensitive for detecting potency, selectivity varies significantly by assay and chemical class with neurite outgrowth assays and fungicides exhibiting the highest percentage of selective hits. Chemicals from the fungicide, drug, and insecticide use classes had higher priority in the Pareto and ToxPi analysis based on having the most potent and selective activity in the assays. These prioritization methods represent a novel and useful approach for comparative evaluation of potential developmental neurotoxicity hazard in large groups of chemicals.
Summary
Summary data
- Data Release - Phase 1 (9 MB)
Curated Data From Assays of Key Neurodevelopmental Processes
HCI hNP1 Proliferation
- DNT NTP2021 EPA HCI hNP1 CellTiter 2023-01-12 Output (316 KB)
- DNT NTP2021 EPA HCI hNP1 Proliferation 2023-01-12 Output (589 KB)
HCI hNP1 Apoptosis
- DNT NTP2021 EPA HCI hNP1 Casp3 7 2023-01-12 Output (313 KB)
- DNT NTP2021 EPA HCI hNP1 Casp3 7 and hNP1 CellTiter 2023-01-12 Output (438 KB)
UKN2 NCC Migration
- UKN2 Datasheet Results PreScreen1 (1) output (35 KB)
- UKN2 Datasheet Results PreScreen1 (2) output (10 KB)
- UKN2 Datasheet Results PreScreen2 (1) output (114 KB)
- UKN2 Datasheet Results PreScreen2 (2) output (16 KB)
- UKN2 Datasheet Results PrimaryScreen (1) output (140 KB)
- UKN2 Datasheet Results PrimaryScreen (2) output (10 KB)
HCI iCellGlutaInitiation
HCI Cortical Initiation
HCI Cortical Maturation@288h and HCI Cortical Synapses
MEA Dev Network Formation
NPC1-5 (Proliferation, Radial Glia Migration, Neuron Migration, Oligo Migration, Neuron Differentiation, Neurite Outgrowth, Oligo Differentiation)
- 20220810 data output NTP NPC1 output (520 KB)
- 20221212 data output NTP NPC1-5 output (5 MB)
- 20230224 data output NTP NPC1-5 output (6 MB)
LDTT Locomotor Activity
- DRF Rd1-3 S-BBD-0012 21 User (44 KB)
- DRF Rd4 S-BBD-0012 21 User (16 KB)
- DRF Rd5 S-BBD-0012 21 User (16 KB)
- DRF Rd6 S-BBD-0012 21 User (10 KB)
- DRF Rd7 S-BBD-0012 21 User (10 KB)
- DRF Rd8 S-BBD-0012 21 User (10 KB)
- DRF Rd9 S-BBD-0012 21 User (10 KB)
- DRF Rd10 S-BBD-0012 21 User (13 KB)
- DRF Rd11 S-BBD-0012 21 User (8 KB)
- DRF Rd12 S-BBD-0012 21 User (8 KB)
- DRF Rd13 S-BBD-0012 21 User (6 KB)